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Schema
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1105
target gene predictions
797
accessible chromatin
476
gene expression
455
differential activity
363
candidate regulatory elements
210
histone modifications
197
chromatin state
100
binding sites
78
variant allelic effects
47
eQTL
21
caQTL
5
hQTL
5
sQTL
3
meQTL
1
other
Date released
1050
July, 2026
487
September, 2022
456
February, 2021
323
November, 2021
303
May, 2026
281
September, 2023
255
May, 2021
149
February, 2024
85
May, 2020
55
March, 2023
54
January, 2021
53
June, 2020
41
August, 2021
39
May, 2022
37
May, 2024
31
October, 2022
30
January, 2022
30
July, 2025
23
January, 2020
18
April, 2020
16
February, 2020
9
August, 2018
9
November, 2022
7
October, 2019
6
August, 2017
5
March, 2020
3
February, 2023
3
November, 2020
2
January, 2025
1
July, 2020
1
June, 2021
1
March, 2024
Available data
2690
bed bed3+
608
tsv
399
bigWig
164
bed bed9
107
txt
27
bed bed9+
16
bigBed narrowPeak
11
bed bed3
11
bed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
2
csv
Organism
3818
Homo sapiens
Collection Tags
543
ENCODE-rE2G
480
EpiMap
374
HDMA
371
DGA
361
AMP
349
T2DKP
320
T1D
303
pyxis
281
KPMP
216
ChIP-Atlas
210
BLUEPRINT
207
ENCODE
133
CATlas
79
T2DKP
55
HPAP
38
T2D
28
eQTLCatalogue
24
FNIH_projects-heart
14
CMDGA
12
ROADMAP
11
FNIH_projects-liver
6
4DN
1
GTEx
Biosample type
5951
tissue
3863
primary cell
2555
cell line
514
in vitro differentiated cells
4
stem cell
Organ
822
epithelium
466
blood
335
kidney
333
connective tissue
229
brain
193
heart
169
skin of body
169
vasculature
150
pancreas
134
liver
122
blood vessel
76
lung
66
eye
62
musculature of body
57
__MARKER__
50
mammary gland
47
adipose tissue
44
muscle organ
43
extraembryonic component
41
penis
36
artery
34
thymus
24
adrenal gland
23
intestine
23
thyroid gland
22
embryo
22
spleen
20
vein
18
bone element
17
lymphatic vessel
16
bronchus
13
bone marrow
11
esophagus
11
placenta
11
prostate gland
11
stomach
9
bodily fluid
6
large intestine
5
skeleton
5
trachea
5
uterus
4
gonad
4
mouth
4
small intestine
4
spinal cord
2
ovary
1
limb
1
pericardium
1
testis
Project
3180
AMP
323
ENCODE
281
KPMP
57
T1D
18
LungMap
4
community
Genome assembly (visualization)
1820
hg19
1784
GRCh38
Encyclopedia version
1
Adipocyte.narrowpeak.bed.gz Adipocyte.consensus_summit_features.bed.gz
1
Endothelial.narrowpeak.bed.gz Endothelial.consensus_summit_features.bed.gz
1
FAP.narrowpeak.bed.gz Mesenchymal_Stem_Cell.consensus_summit_features.bed.gz
1
Neuromuscular_junction.narrowpeak.bed.gz Neuromuscular_junction.consensus_summit_features.bed.gz
1
Neuronal.narrowpeak.bed.gz Neuronal.consensus_summit_features.bed.gz
1
Satellite_Cell.narrowpeak.bed.gz Satellite_Cell.consensus_summit_features.bed.gz
1
Smooth_Muscle.narrowpeak.bed.gz Smooth_Muscle.consensus_summit_features.bed.gz
1
T_cell.narrowpeak.bed.gz T_cell.consensus_summit_features.bed.gz
1
Type_1.narrowpeak.bed.gz Type_1.consensus_summit_features.bed.gz
1
Type_2a.narrowpeak.bed.gz Type_2a.consensus_summit_features.bed.gz
1
Type_2x.narrowpeak.bed.gz Type_2x.consensus_summit_features.bed.gz
biosample_term_name!
macrophage
BIOSAMPLE
TYPE
3863 results
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target gene predictions
accessible chromatin
gene expression
differential activity
candidate regulatory elements
histone modifications
chromatin state
binding sites
variant allelic effects
eQTL
caQTL
hQTL
sQTL
meQTL
other
primary cell
monocyte
2
18
15
4
86
1
4
2
1
1
fibroblast
28
40
10
3
1
6
2
endothelial cell
17
24
9
25
3
1
2
2
2
3
CD8-positive, alpha-beta T cell
27
4
3
7
30
1
T-cell
64
4
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