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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1706candidate regulatory elements
  • 1353target gene predictions
  • 976histone modifications
  • 904chromatin state
  • 900accessible chromatin
  • 816binding sites
  • 687gene expression
  • 180eQTL
  • 172differential activity
  • 138variant allelic effects
  • 83Fine-mapped variants
  • 12caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 2588February, 2021
  • 2511September, 2022
  • 382May, 2021
  • 375February, 2024
  • 323November, 2021
  • 288June, 2020
  • 286September, 2023
  • 151May, 2020
  • 128March, 2020
  • 127August, 2021
  • 101October, 2022
  • 99January, 2022
  • 83January, 2020
  • 70March, 2023
  • 64February, 2020
  • 54January, 2021
  • 48May, 2022
  • 44November, 2022
  • 37May, 2024
  • 35March, 2025
  • 31August, 2017
  • 31February, 2023
  • 30March, 2024
  • 18April, 2020
  • 13November, 2019
  • 9August, 2018
  • 9October, 2019
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 2January, 2025
  • 1April, 2019
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 6051bed bed3+
  • 3571tsv
  • 869bed bed9
  • 535bigWig
  • 107txt
  • bigBed bed9
  • 34bed bed9+
  • 26csv
  • 16bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 10542Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2499EpiMap
  • 1845ChIP-Atlas
  • 965ENCODE
  • 635DGA
  • 521AMP
  • 411T1D
  • 395T2DKP
  • 281KPMP
  • 218BLUEPRINT
  • 1744DN
  • 172 T2DKP
  • 151GTEx
  • 104T2D
  • 99CMDGA
  • 94eQTLCatalogue
  • 67HPAP
  • 40STARNET
  • 24FNIH_projects-heart
  • 12ROADMAP
  • 11FNIH_projects-liver
Biosample type
  • 5292tissue
  • 2479primary cell
  • 2348cell line
  • 465in vitro differentiated cells
  • 4stem cell
Organ
  • 2905vasculature
  • 2859bodily fluid
  • 2848blood
  • 2840blood vessel
  • 2656vein
  • 956epithelium
  • 650kidney
  • 478connective tissue
  • 461brain
  • 377musculature of body
  • 311lung
  • 289intestine
  • 275pancreas
  • 247heart
  • 240limb
  • 215embryo
  • 204skin of body
  • 174large intestine
  • 162liver
  • 146extraembryonic component
  • 119stomach
  • 109eye
  • 98adipose tissue
  • 89bone element
  • 87mammary gland
  • 84small intestine
  • 83uterus
  • 78prostate gland
  • 77artery
  • 73adrenal gland
  • 73placenta
  • 64penis
  • 64ureter
  • 62lymph node
  • 50gonad
  • 49thymus
  • 45esophagus
  • 43spinal cord
  • 34spleen
  • 26testis
  • 24lymphatic vessel
  • 24lymphoid tissue
  • 24nerve
  • 23ovary
  • 23thyroid gland
  • 19mouth
  • 18skeleton
  • 16bronchus
  • 13bone marrow
  • 13breast
  • 13pituitary gland
  • 10tongue
  • 10urinary bladder
  • 10vagina
  • 5trachea
  • 4nose
  • 1pericardium
Project
  • 9892AMP
  • 323ENCODE
  • 281KPMP
  • 58T1D
  • 18LungMap
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 6937hg19
  • 1856GRCh38
  • 4hg18
biosample_term_name!
  • macrophage
files.file_type!
  • bigBed bed9
BIOSAMPLE
TYPE

10590 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
target gene predictions
histone modifications
chromatin state
accessible chromatin
binding sites
gene expression
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart37201195132
stomach4021119311
kidney2914214101711
brain291631621121
primary cell
monocyte286181154121
common myeloid progenitor, CD34-positive271413
CD8-positive, alpha-beta T cell7530143
B cell1710862
endothelial cell3711529122
cell line
HeLa-S355531
A549211911812
H1-hESC13911128
K5627231712
MCF-7962513
in vitro differentiated cells
neural progenitor cell55154107
hematopoietic multipotent progenitor cell1910110111
adipocyte4616411
cardiomyocytes11
mesenchymal stem cell331211
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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