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Schema
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1106
target gene predictions
816
accessible chromatin
476
gene expression
454
differential activity
357
candidate regulatory elements
209
histone modifications
194
chromatin state
100
binding sites
81
variant allelic effects
54
eQTL
23
caQTL
5
hQTL
5
sQTL
3
meQTL
1
other
Date released
1062
July, 2026
478
September, 2022
451
February, 2021
333
November, 2021
302
May, 2026
281
September, 2023
255
May, 2021
152
February, 2024
85
May, 2020
55
March, 2023
54
January, 2021
53
June, 2020
41
August, 2021
40
May, 2022
37
May, 2024
36
January, 2022
33
July, 2025
31
October, 2022
23
January, 2020
18
April, 2020
16
February, 2020
9
August, 2018
9
November, 2022
7
October, 2019
6
August, 2017
5
March, 2020
4
February, 2023
3
November, 2020
2
January, 2025
1
July, 2020
1
June, 2021
1
March, 2024
Available data
2712
bed bed3+
610
tsv
407
bigWig
161
bed bed9
107
txt
27
bed bed9+
16
bigBed narrowPeak
12
bed bed3
12
bed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
2
csv
Organism
3840
Homo sapiens
Collection Tags
536
ENCODE-rE2G
471
EpiMap
393
HDMA
373
AMP
373
DGA
359
T2DKP
327
T1D
302
pyxis
281
KPMP
215
ChIP-Atlas
211
BLUEPRINT
205
ENCODE
133
CATlas
81
T2DKP
55
HPAP
44
T2D
34
eQTLCatalogue
24
FNIH_projects-heart
15
CMDGA
12
ROADMAP
11
FNIH_projects-liver
6
4DN
1
GTEx
Biosample type
5951
tissue
3884
primary cell
2559
cell line
512
in vitro differentiated cells
4
stem cell
Organ
822
epithelium
459
blood
336
connective tissue
335
kidney
231
brain
195
heart
171
skin of body
169
vasculature
150
pancreas
131
liver
123
blood vessel
78
lung
68
eye
62
musculature of body
55
__MARKER__
50
adipose tissue
50
mammary gland
46
muscle organ
43
extraembryonic component
41
penis
37
artery
36
thymus
25
adrenal gland
24
spleen
23
intestine
23
thyroid gland
22
embryo
20
vein
18
bone element
17
lymphatic vessel
16
bronchus
13
bone marrow
11
esophagus
11
placenta
11
prostate gland
11
stomach
9
bodily fluid
6
large intestine
5
skeleton
5
trachea
5
uterus
4
gonad
4
mouth
4
small intestine
4
spinal cord
2
ovary
1
limb
1
pericardium
1
testis
Project
3191
AMP
333
ENCODE
281
KPMP
57
T1D
18
LungMap
4
community
Genome assembly (visualization)
1820
hg19
1812
GRCh38
Encyclopedia version
1
Adipocyte.narrowpeak.bed.gz Adipocyte.consensus_summit_features.bed.gz
1
Endothelial.narrowpeak.bed.gz Endothelial.consensus_summit_features.bed.gz
1
FAP.narrowpeak.bed.gz Mesenchymal_Stem_Cell.consensus_summit_features.bed.gz
1
Macrophage.narrowpeak.bed.gz Macrophage.consensus_summit_features.bed.gz
1
Neuromuscular_junction.narrowpeak.bed.gz Neuromuscular_junction.consensus_summit_features.bed.gz
1
Neuronal.narrowpeak.bed.gz Neuronal.consensus_summit_features.bed.gz
1
Satellite_Cell.narrowpeak.bed.gz Satellite_Cell.consensus_summit_features.bed.gz
1
Smooth_Muscle.narrowpeak.bed.gz Smooth_Muscle.consensus_summit_features.bed.gz
1
T_cell.narrowpeak.bed.gz T_cell.consensus_summit_features.bed.gz
1
Type_1.narrowpeak.bed.gz Type_1.consensus_summit_features.bed.gz
1
Type_2a.narrowpeak.bed.gz Type_2a.consensus_summit_features.bed.gz
1
Type_2x.narrowpeak.bed.gz Type_2x.consensus_summit_features.bed.gz
biosample_term_name!
natural killer cell
BIOSAMPLE
TYPE
3884 results
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target gene predictions
accessible chromatin
gene expression
differential activity
candidate regulatory elements
histone modifications
chromatin state
binding sites
variant allelic effects
eQTL
caQTL
hQTL
sQTL
meQTL
other
primary cell
monocyte
2
18
15
4
86
1
4
2
1
1
fibroblast
28
40
10
3
1
6
2
endothelial cell
17
24
9
25
3
1
2
2
2
3
CD8-positive, alpha-beta T cell
27
4
3
7
30
1
macrophage
13
22
2
17
3
3
8
2
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