Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 1653target gene predictions
  • 323accessible chromatin
Date released
  • 2636February, 2025
  • 2585February, 2021
  • 2505September, 2022
  • 1976July, 2026
  • 388May, 2021
  • 373February, 2024
  • 333November, 2021
  • 320May, 2026
  • 287June, 2020
  • 286September, 2023
  • 154May, 2020
  • 128August, 2021
  • 126March, 2020
  • 105January, 2022
  • 101October, 2022
  • 87January, 2020
  • 70March, 2023
  • 64February, 2020
  • 56January, 2021
  • 49May, 2022
  • 44November, 2022
  • 40May, 2024
  • 34August, 2017
  • 33July, 2025
  • 32February, 2023
  • 30March, 2024
  • 19April, 2020
  • 14November, 2019
  • 13October, 2019
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 4March, 2026
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 2January, 2025
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 1976bed bed3+
Organism
  • 1976Homo sapiens
Collection Tags
  • 1450ENCODE-rE2G
  • 393HDMA
  • 133CATlas
Biosample type
  • 1069primary cell
  • 656tissue
  • 207cell line
  • 44in vitro differentiated cells
Organ
  • 523blood
  • 418brain
  • 129lung
  • 111muscle organ
  • 93heart
  • 92skin of body
  • 87kidney
  • 69intestine
  • 52eye
  • 52large intestine
  • 44thymus
  • 43liver
  • 29adrenal gland
  • 29spleen
  • 28extraembryonic component
  • 24placenta
  • 24thyroid gland
  • 21stomach
  • 17mammary gland
  • 15bone element
  • 14gonad
  • 13blood vessel
  • 13small intestine
  • 10pancreas
  • 10uterus
  • 9ovary
  • 9prostate gland
  • 9ureter
  • 6spinal cord
  • 5artery
  • 5connective tissue
  • 5testis
  • 4adipose tissue
  • 4skeleton
  • 3esophagus
  • 3urinary bladder
  • 2breast
  • 2mouth
  • 2tongue
  • 2vagina
  • 1embryonic structure
  • 1gallbladder
  • 1vein
Project
  • 1976AMP
Genome assembly (visualization)
  • 1976GRCh38
biosample_term_name!
  • pancreas
BIOSAMPLE
TYPE

1976 results

search-icontable-tab-icon
Clear Filters
target gene predictions
accessible chromatin
primary cell
T-cell62
stimulated activated CD4-positive, alpha-beta T cell55
CD4-positive, alpha-beta T cell49
fibroblast2424
activated CD4-positive, alpha-beta T cell29
tissue
head of caudate nucleus86
dorsolateral prefrontal cortex56
posterior cingulate gyrus48
placenta22
stomach21
cell line
HCT11616
A54914
H97
K5627
MCF-77
in vitro differentiated cells
hematopoietic multipotent progenitor cell12
brain2
cardiac muscle cell2
endodermal cell2
mesothelial cell of epicardium2
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego