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Schema
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1115
target gene predictions
813
accessible chromatin
475
gene expression
463
differential activity
366
candidate regulatory elements
208
histone modifications
197
chromatin state
99
binding sites
80
variant allelic effects
55
eQTL
23
caQTL
5
hQTL
5
sQTL
3
meQTL
1
other
Date released
1069
July, 2026
487
September, 2022
453
February, 2021
330
November, 2021
314
May, 2026
281
September, 2023
254
May, 2021
150
February, 2024
86
May, 2020
54
January, 2021
52
June, 2020
51
March, 2023
42
August, 2021
40
May, 2022
40
May, 2024
37
January, 2022
33
July, 2025
31
October, 2022
23
January, 2020
19
April, 2020
16
February, 2020
9
November, 2022
8
August, 2018
6
August, 2017
6
October, 2019
5
March, 2020
4
February, 2023
3
November, 2020
2
January, 2025
1
July, 2020
1
June, 2021
1
March, 2024
Available data
2726
bed bed3+
607
tsv
405
bigWig
164
bed bed9
108
txt
27
bed bed9+
15
bigBed narrowPeak
12
bed bed3
12
bed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
2
csv
Organism
3863
Homo sapiens
Collection Tags
543
ENCODE-rE2G
480
EpiMap
393
HDMA
373
DGA
369
AMP
354
T2DKP
328
T1D
314
pyxis
281
KPMP
212
ChIP-Atlas
211
BLUEPRINT
208
ENCODE
133
CATlas
77
T2DKP
51
HPAP
45
T2D
35
eQTLCatalogue
26
FNIH_projects-heart
15
CMDGA
12
FNIH_projects-liver
12
ROADMAP
6
4DN
1
GTEx
Biosample type
5949
tissue
3908
primary cell
2558
cell line
511
in vitro differentiated cells
4
stem cell
Organ
803
epithelium
466
blood
338
connective tissue
335
kidney
231
brain
205
heart
171
skin of body
169
vasculature
135
liver
126
pancreas
123
blood vessel
78
lung
68
eye
62
musculature of body
59
__MARKER__
52
adipose tissue
50
mammary gland
46
muscle organ
43
extraembryonic component
41
penis
37
artery
36
thymus
25
adrenal gland
24
spleen
23
intestine
23
thyroid gland
22
embryo
20
vein
18
bone element
17
lymphatic vessel
16
bronchus
13
bone marrow
11
esophagus
11
placenta
11
prostate gland
11
stomach
9
bodily fluid
6
large intestine
5
skeleton
5
trachea
5
uterus
4
gonad
4
mouth
4
small intestine
4
spinal cord
2
ovary
1
limb
1
pericardium
1
testis
Project
3217
AMP
330
ENCODE
281
KPMP
57
T1D
19
LungMap
4
community
Genome assembly (visualization)
1828
hg19
1822
GRCh38
Encyclopedia version
1
Adipocyte.narrowpeak.bed.gz Adipocyte.consensus_summit_features.bed.gz
1
Endothelial.narrowpeak.bed.gz Endothelial.consensus_summit_features.bed.gz
1
FAP.narrowpeak.bed.gz Mesenchymal_Stem_Cell.consensus_summit_features.bed.gz
1
Macrophage.narrowpeak.bed.gz Macrophage.consensus_summit_features.bed.gz
1
Neuromuscular_junction.narrowpeak.bed.gz Neuromuscular_junction.consensus_summit_features.bed.gz
1
Neuronal.narrowpeak.bed.gz Neuronal.consensus_summit_features.bed.gz
1
Satellite_Cell.narrowpeak.bed.gz Satellite_Cell.consensus_summit_features.bed.gz
1
Smooth_Muscle.narrowpeak.bed.gz Smooth_Muscle.consensus_summit_features.bed.gz
1
T_cell.narrowpeak.bed.gz T_cell.consensus_summit_features.bed.gz
1
Type_1.narrowpeak.bed.gz Type_1.consensus_summit_features.bed.gz
1
Type_2a.narrowpeak.bed.gz Type_2a.consensus_summit_features.bed.gz
1
Type_2x.narrowpeak.bed.gz Type_2x.consensus_summit_features.bed.gz
biosample_term_name!
pancreatic ductal cell
BIOSAMPLE
TYPE
3908 results
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target gene predictions
accessible chromatin
gene expression
differential activity
candidate regulatory elements
histone modifications
chromatin state
binding sites
variant allelic effects
eQTL
caQTL
hQTL
sQTL
meQTL
other
primary cell
monocyte
2
18
15
4
86
1
4
2
1
1
fibroblast
28
40
10
3
1
6
2
endothelial cell
17
24
9
25
3
1
2
2
2
3
CD8-positive, alpha-beta T cell
27
4
3
7
30
1
macrophage
13
22
2
17
3
3
8
2
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