Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
3018
target gene predictions
2638
pQTL
1709
candidate regulatory elements
1248
accessible chromatin
977
histone modifications
944
chromatin state
817
binding sites
685
gene expression
481
differential activity
156
eQTL
141
variant allelic effects
74
Fine-mapped variants
25
caQTL
7
sQTL
5
hQTL
4
variant to gene
3
meQTL
3
other
1
representative DNase hypersensitivity sites
Date released
2636
February, 2025
2590
February, 2021
2511
September, 2022
1984
July, 2026
389
May, 2021
373
February, 2024
333
November, 2021
320
May, 2026
289
June, 2020
286
September, 2023
155
May, 2020
128
August, 2021
128
March, 2020
106
January, 2022
101
October, 2022
89
January, 2020
67
March, 2023
56
January, 2021
49
May, 2022
44
November, 2022
40
February, 2020
40
May, 2024
35
August, 2017
33
July, 2025
32
February, 2023
30
March, 2024
19
April, 2020
14
November, 2019
14
October, 2019
9
August, 2018
9
May, 2019
8
April, 2019
4
March, 2026
3
November, 2020
3
September, 2018
2
January, 2018
2
January, 2025
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
8068
bed bed3+
3524
tsv
869
bed bed9
546
bigWig
112
txt
40
bigBed bed9
34
bed bed9+
26
csv
16
bigBed narrowPeak
12
bed bed3
12
bed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
12889
Homo sapiens
Collection Tags
2635
UK_Biobank
2499
EpiMap
1848
ChIP-Atlas
1458
ENCODE-rE2G
966
ENCODE
646
DGA
534
AMP
421
T1D
406
T2DKP
393
HDMA
320
pyxis
281
KPMP
219
BLUEPRINT
174
4DN
169
T2DKP
133
CATlas
127
GTEx
111
T2D
101
eQTLCatalogue
100
CMDGA
64
HPAP
26
FNIH_projects-heart
12
FNIH_projects-liver
12
ROADMAP
Biosample type
5927
tissue
3930
primary cell
2559
cell line
514
in vitro differentiated cells
4
stem cell
Organ
3365
blood
2899
vasculature
2858
blood vessel
2853
bodily fluid
2659
vein
952
epithelium
891
brain
756
kidney
513
connective tissue
485
heart
440
lung
384
musculature of body
358
intestine
315
pancreas
296
skin of body
241
limb
239
liver
226
large intestine
215
embryo
174
extraembryonic component
161
eye
140
adipose tissue
140
stomach
111
muscle organ
104
bone element
104
mammary gland
102
adrenal gland
97
placenta
97
small intestine
93
thymus
93
uterus
87
prostate gland
86
artery
73
ureter
64
gonad
64
penis
63
spleen
62
lymph node
60
__MARKER__
48
esophagus
48
spinal cord
47
thyroid gland
32
ovary
31
testis
24
lymphoid tissue
24
nerve
22
skeleton
21
lymphatic vessel
21
mouth
16
bronchus
15
breast
13
bone marrow
13
pituitary gland
13
urinary bladder
12
tongue
12
vagina
5
trachea
4
nose
1
embryonic structure
1
gallbladder
1
pericardium
Project
12221
AMP
333
ENCODE
281
KPMP
60
T1D
19
LungMap
17
community
5
ITG
Genome assembly (visualization)
6978
hg19
3881
GRCh38
4
hg18
Encyclopedia version
1
Adipocyte.narrowpeak.bed.gz Adipocyte.consensus_summit_features.bed.gz
1
Endothelial.narrowpeak.bed.gz Endothelial.consensus_summit_features.bed.gz
1
FAP.narrowpeak.bed.gz Mesenchymal_Stem_Cell.consensus_summit_features.bed.gz
1
Macrophage.narrowpeak.bed.gz Macrophage.consensus_summit_features.bed.gz
1
Neuromuscular_junction.narrowpeak.bed.gz Neuromuscular_junction.consensus_summit_features.bed.gz
1
Neuronal.narrowpeak.bed.gz Neuronal.consensus_summit_features.bed.gz
1
Satellite_Cell.narrowpeak.bed.gz Satellite_Cell.consensus_summit_features.bed.gz
1
Smooth_Muscle.narrowpeak.bed.gz Smooth_Muscle.consensus_summit_features.bed.gz
1
T_cell.narrowpeak.bed.gz T_cell.consensus_summit_features.bed.gz
1
Type_1.narrowpeak.bed.gz Type_1.consensus_summit_features.bed.gz
1
Type_2a.narrowpeak.bed.gz Type_2a.consensus_summit_features.bed.gz
1
Type_2x.narrowpeak.bed.gz Type_2x.consensus_summit_features.bed.gz
biosample_term_name!
pancreatic quiescent stellate cell
software_used.software.name!
gtex_eqtl:V8
BIOSAMPLE
TYPE
12936 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
pQTL
candidate regulatory elements
accessible chromatin
histone modifications
chromatin state
binding sites
gene expression
differential activity
eQTL
variant allelic effects
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood
2635
1
heart
38
37
5
1
21
1
4
1
2
stomach
42
40
3
1
19
1
1
kidney
28
29
10
2
16
1
7
1
1
brain
30
29
2
3
18
1
1
2
1
+ See 283 more…
primary cell
monocyte
2
18
86
1
15
4
4
1
2
1
fibroblast
28
3
40
1
10
2
6
endothelial cell
17
3
24
1
2
9
25
2
2
3
CD8-positive, alpha-beta T cell
27
7
4
30
1
3
macrophage
13
3
22
2
17
8
3
2
+ See 560 more…
cell line
A549
33
21
1
1
18
2