Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 41target gene predictions
  • 29candidate regulatory elements
  • 16chromatin state
  • 3accessible chromatin
  • 3binding sites
  • 3histone modifications
  • 1eQTL
Date released
  • 48September, 2022
  • 24July, 2026
  • 18February, 2021
  • 2June, 2020
  • 1January, 2022
  • 1May, 2021
  • 1November, 2021
  • 1October, 2022
Available data
  • 80bed bed3+
  • 16bed bed9
  • 1bigWig
Organism
  • 96Homo sapiens
Collection Tags
  • 48EpiMap
  • 24ENCODE-rE2G
  • 14ENCODE
  • 7ChIP-Atlas
  • 1AMP
  • 1DGA
  • 1T1D
  • 1T2D
  • 1T2DKP
  • 1eQTLCatalogue
Biosample type
  • 82tissue
  • 10primary cell
  • 4cell line
Organ
  • 3365blood
  • 2901vasculature
  • 2860blood vessel
  • 2853bodily fluid
  • 2659vein
  • 951epithelium
  • 903brain
  • 756kidney
  • 518connective tissue
  • 488heart
  • 440lung
  • 386musculature of body
  • 358intestine
  • 319pancreas
  • 296skin of body
  • 244limb
  • 240liver
  • 226large intestine
  • 215embryo
  • 173extraembryonic component
  • 161eye
  • 142adipose tissue
  • 140stomach
  • 111muscle organ
  • 104bone element
  • 104mammary gland
  • 102adrenal gland
  • 97small intestine
  • 96placenta
  • 93thymus
  • 93uterus
  • 88artery
  • 87prostate gland
  • 73ureter
  • 64gonad
  • 64penis
  • 63spleen
  • 62lymph node
  • 60__MARKER__
  • 49spinal cord
  • 48esophagus
  • 47thyroid gland
  • 32ovary
  • 31testis
  • 25nerve
  • 24lymphoid tissue
  • 22skeleton
  • 21lymphatic vessel
  • 21mouth
  • 16bronchus
  • 15breast
  • 13bone marrow
  • 13pituitary gland
  • 13urinary bladder
  • 12tongue
  • 12vagina
  • 5trachea
  • 4nose
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 95AMP
  • 1ENCODE
Genome assembly (visualization)
  • 71hg19
  • 42GRCh38
biosample_term_name!
  • placental villus capillary endothelial cell
BIOSAMPLE
TYPE

96 results

search-icontable-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
tissue
placenta3726141121
primary cell
fibroblast of villous mesenchyme221121
placental hematopoietic stem cell1
cell line
HTR-8/Svneo111
HTR-8/SVneo1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego