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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 140candidate regulatory elements
  • 77target gene predictions
  • 71chromatin state
  • 31accessible chromatin
  • 10gene expression
  • 9eQTL
  • 7binding sites
  • 7variant allelic effects
  • 6Fine-mapped variants
  • 6caQTL
  • 6histone modifications
Date released
  • 195September, 2022
  • 87February, 2021
  • 14February, 2024
  • 12July, 2025
  • 11November, 2021
  • 9March, 2020
  • 6June, 2020
  • 6May, 2021
  • 5February, 2020
  • 5January, 2020
  • 5May, 2020
  • 3August, 2017
  • 3May, 2022
  • 3October, 2022
  • 2March, 2024
  • 2May, 2019
  • 1January, 2022
  • 1October, 2019
Available data
  • 272bed bed3+
  • 68bed bed9
  • 20tsv
  • 16bigWig
  • 4bed bed3
  • 4bed narrowPeak
  • 3bigBed bed9
Organism
  • 370Homo sapiens
Collection Tags
  • 195EpiMap
  • 76ENCODE
  • 31DGA
  • 28 T2DKP
  • 18ChIP-Atlas
  • 17T2DKP
  • 12GTEx
  • 11AMP
  • 4T2D
  • 1T1D
  • 1eQTLCatalogue
Biosample type
  • 289tissue
  • 62primary cell
  • 17cell line
  • 2in vitro differentiated cells
Organ
  • 2902vasculature
  • 2853bodily fluid
  • 2848blood vessel
  • 2842blood
  • 2658vein
  • 952epithelium
  • 669kidney
  • 513connective tissue
  • 485brain
  • 395heart
  • 370musculature of body
  • 311lung
  • 301pancreas
  • 289intestine
  • 244limb
  • 215embryo
  • 204skin of body
  • 197liver
  • 174large intestine
  • 146extraembryonic component
  • 138adipose tissue
  • 119stomach
  • 109eye
  • 89bone element
  • 87mammary gland
  • 84small intestine
  • 83artery
  • 83uterus
  • 78prostate gland
  • 73adrenal gland
  • 73placenta
  • 64penis
  • 64ureter
  • 62lymph node
  • 60__MARKER__
  • 50gonad
  • 49thymus
  • 45esophagus
  • 43spinal cord
  • 34spleen
  • 26testis
  • 25nerve
  • 24lymphoid tissue
  • 23ovary
  • 23thyroid gland
  • 21lymphatic vessel
  • 19mouth
  • 18skeleton
  • 16bronchus
  • 13bone marrow
  • 13breast
  • 13pituitary gland
  • 10tongue
  • 10urinary bladder
  • 10vagina
  • 5trachea
  • 4nose
  • 1pericardium
Project
  • 359AMP
  • 11ENCODE
Genome assembly (visualization)
  • 352hg19
  • 97GRCh38
Encyclopedia version
  • 1Satellite_Cell.narrowpeak.bed.gz Satellite_Cell.consensus_summit_features.bed.gz
  • 1Type_1.narrowpeak.bed.gz Type_1.consensus_summit_features.bed.gz
  • 1Type_2a.narrowpeak.bed.gz Type_2a.consensus_summit_features.bed.gz
  • 1Type_2x.narrowpeak.bed.gz Type_2x.consensus_summit_features.bed.gz
biosample_term_name!
  • skeletal muscle tissue
BIOSAMPLE
TYPE

370 results

search-icontable-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
eQTL
binding sites
variant allelic effects
Fine-mapped variants
caQTL
histone modifications
tissue
muscle of arm33161611
muscle of leg2714152
muscle of back281313
psoas muscle7841
gastrocnemius medialis8541
muscle of trunk854
esophagus muscularis mucosa52211
stomach smooth muscle423
gastroesophageal sphincter511
gastrocnemius medialis(Muscle - Skeletal)113
left ventricle myocardium113
rectum smooth muscle tissue112
hindlimb muscle11
muscle of leg2
forelimb muscle11
respiratory system smooth muscle11
esophagus - gastroesophageal junction1
esophagus - muscularis1
hindlimb muscle1
rectal smooth muscle tissue1
skeletal muscle1
smooth muscle tissue1
primary cell
skeletal muscle satellite cell2226211
skeletal muscle fiber522
type I muscle cell13111
type II muscle cell13111
skeletal muscle cell21111
myotube21
type 1 muscle cell111
type 2a muscle cell111
type 2x muscle cell111
cardiac muscle myoblast11
somatic muscle myotube11
aortic smooth muscle cell1
cell line
LHCN-M2211111
A673221
SJCRH302111
in vitro differentiated cells
myotube11
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