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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 326ChIP-seq
  • 5total RNA-seq
  • 1WGBS
Assay category
  • 326DNA binding
  • 5Transcription
  • 1DNA methylation
Target of assay
  • 292transcription factor
  • 81recombinant protein
  • 52RNA binding protein
  • 20chromatin remodeller
  • 18histone
  • 18histone modification
  • 13control
  • 9broad histone mark
  • 9narrow histone mark
  • 2other context
  • 2other post-translational modification
Date released
  • 268November, 2017
  • 45November, 2018
  • 14August, 2021
  • 5January, 2019
Available data
  • 367fastq
  • 366bam
  • 332bigWig
  • 308bed narrowPeak
  • 293bigBed narrowPeak
  • 58bed broadPeak
  • 58bigBed broadPeak
  • 15tsv
  • 12tagAlign
  • 3tar
  • 1bed bed3
  • 1bed bed3+
  • 1bed bedMethyl
  • 1bedpe bed3+
  • 1bigBed bedMethyl
  • 1hic
  • 1vcf
Organism
  • 332Homo sapiens
Biosample type
  • 332cell line
Organ
  • 332liver
Project
  • 332AMP
Genome assembly (visualization)
  • 327hg19
  • 267GRCh38
Lab
  • 318AMP-T2D consortium
  • 14Bing Ren, UCSD
Audit category:
  • 12missing controlled_by
Audit category:
  • 26inconsistent control read length
  • 8inconsistent control run_type
BIOSAMPLE
ASSAY

332 results

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HepG232651
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