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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 43ChIP-seq
  • 9total RNA-seq
  • 1Hi-C
  • 1whole genome sequencing assay
Assay category
  • 43DNA binding
  • 9Transcription
  • 13D chromatin structure
  • 1DNA sequencing
Target of assay
  • 30control
  • 10transcription factor
  • 3histone
  • 3histone modification
  • 2narrow histone mark
  • 1RNA binding protein
  • 1broad histone mark
  • 1recombinant protein
Date released
  • 27August, 2021
  • 26November, 2017
  • 1November, 2018
Available data
  • 27bam
  • 27fastq
  • 16bigWig
  • 12bed narrowPeak
  • 9tsv
  • 1bedpe bed3+
  • 1hic
  • 1vcf
Organism
  • 54Homo sapiens
Biosample type
  • 54cell line
Organ
  • 54liver
Project
  • 54AMP
Genome assembly (visualization)
  • 17hg19
Lab
  • 27AMP-T2D consortium
  • 27Bing Ren, UCSD
Audit category:
  • 1missing controlled_by
BIOSAMPLE
ASSAY

54 results

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ChIP-seq
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Hi-C
whole genome sequencing assay
cell line
HepG243911
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