Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
59
ChIP-seq
8
ATAC-seq
5
total RNA-seq
1
Capture-C
1
DNase-seq
Assay category
59
DNA binding
9
DNA accessibility
5
Transcription
Target of assay
37
histone
37
histone modification
22
transcription factor
20
broad histone mark
16
narrow histone mark
control
4
RNA binding protein
2
chromatin remodeller
Date released
60
August, 2017
8
February, 2021
2
August, 2021
2
February, 2023
2
October, 2019
Available data
55
bigWig
52
bam
48
fastq
44
bed narrowPeak
12
tagAlign
8
bed bed3+
4
bed bedgraph
4
tsv
3
bigBed narrowPeak
1
bed broadPeak
1
bigBed broadPeak
Organism
74
Homo sapiens
Biosample type
74
in vitro differentiated cells
Organ
74
connective tissue
Project
74
AMP
Genome assembly (visualization)
61
hg19
52
GRCh38
Lab
72
AMP-T2D consortium
2
Struan F.A. Grant, CHOP
Audit category:
5
missing controlled_by
Audit category:
6
inconsistent control read length
files.file_type!
bedpe bed3+
target.investigated_as!
control
BIOSAMPLE
ASSAY
74 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
ATAC-seq
total RNA-seq
Capture-C
DNase-seq
in vitro differentiated cells
adipocyte
59
8
5
1
1
Download