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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 14ChIP-seq
  • 8ATAC-seq
  • 5total RNA-seq
  • 1Capture-C
Assay category
  • 14DNA binding
  • 8DNA accessibility
  • 5Transcription
Target of assay
  • 12histone
  • 12histone modification
  • 8broad histone mark
  • 4narrow histone mark
  • 2control
Date released
  • 14August, 2017
  • 8February, 2021
  • 2August, 2021
  • 2February, 2023
  • 2October, 2019
Available data
  • 58bam
  • 55bigWig
  • fastq
  • 44bed narrowPeak
  • 14tagAlign
  • 9bed bed3+
  • 4bed bedgraph
  • 4tsv
  • 3bigBed narrowPeak
  • 1bed broadPeak
  • 1bigBed broadPeak
Organism
  • 28Homo sapiens
Biosample type
  • 28in vitro differentiated cells
Organ
  • 28connective tissue
Project
  • 28AMP
Genome assembly (visualization)
  • 13hg19
  • 4GRCh38
Lab
  • 26AMP-T2D consortium
  • 2Struan F.A. Grant, CHOP
files.file_type!
  • fastq
BIOSAMPLE
ASSAY

28 results

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ChIP-seq
ATAC-seq
total RNA-seq
Capture-C
in vitro differentiated cells
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