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Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
67
ChIP-seq
8
ATAC-seq
5
total RNA-seq
1
Capture-C
1
DNase-seq
Assay category
67
DNA binding
9
DNA accessibility
5
Transcription
Target of assay
37
histone
37
histone modification
22
transcription factor
20
broad histone mark
16
narrow histone mark
8
control
4
RNA binding protein
2
chromatin remodeller
Date released
68
August, 2017
8
February, 2021
2
August, 2021
2
February, 2023
2
October, 2019
Available data
58
bam
55
bigWig
54
fastq
44
bed narrowPeak
14
tagAlign
9
bed bed3+
4
bed bedgraph
4
tsv
3
bigBed narrowPeak
1
bed broadPeak
1
bigBed broadPeak
Organism
82
Homo sapiens
Biosample type
82
in vitro differentiated cells
Organ
82
connective tissue
Project
82
AMP
Genome assembly (visualization)
62
hg19
53
GRCh38
Lab
80
AMP-T2D consortium
2
Struan F.A. Grant, CHOP
Audit category:
5
missing controlled_by
Audit category:
6
inconsistent control read length
files.file_type!
hdf5
BIOSAMPLE
ASSAY
82 results
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ChIP-seq
ATAC-seq
total RNA-seq
Capture-C
DNase-seq
in vitro differentiated cells
adipocyte
67
8
5
1
1
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