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Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
65
ChIP-seq
8
ATAC-seq
5
total RNA-seq
1
Capture-C
1
DNase-seq
Assay category
65
DNA binding
9
DNA accessibility
5
Transcription
Target of assay
37
histone
37
histone modification
20
broad histone mark
20
transcription factor
16
narrow histone mark
8
control
4
RNA binding protein
2
chromatin remodeller
Date released
66
August, 2017
8
February, 2021
2
August, 2021
2
February, 2023
2
October, 2019
Available data
56
bam
53
bigWig
52
fastq
42
bed narrowPeak
14
tagAlign
7
bed bed3+
4
bed bedgraph
4
tsv
3
bigBed narrowPeak
1
bed broadPeak
1
bigBed broadPeak
Organism
80
Homo sapiens
Biosample type
80
in vitro differentiated cells
Organ
80
connective tissue
Project
80
AMP
Genome assembly (visualization)
60
hg19
51
GRCh38
Lab
78
AMP-T2D consortium
2
Struan F.A. Grant, CHOP
Audit category:
5
missing controlled_by
Audit category:
5
inconsistent control read length
files.read_length!
40
BIOSAMPLE
ASSAY
80 results
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ChIP-seq
ATAC-seq
total RNA-seq
Capture-C
DNase-seq
in vitro differentiated cells
adipocyte
65
8
5
1
1
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