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Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
36
ChIP-seq
8
ATAC-seq
5
total RNA-seq
1
Capture-C
1
DNase-seq
Assay category
36
DNA binding
9
DNA accessibility
5
Transcription
Target of assay
16
transcription factor
13
histone
13
histone modification
8
broad histone mark
7
control
4
narrow histone mark
2
chromatin remodeller
Date released
37
August, 2017
8
February, 2021
2
August, 2021
2
February, 2023
2
October, 2019
Available data
27
bam
25
bigWig
23
fastq
14
bed narrowPeak
14
tagAlign
9
bed bed3+
4
bed bedgraph
4
tsv
3
bigBed narrowPeak
1
bed broadPeak
1
bigBed broadPeak
Organism
51
Homo sapiens
Biosample type
51
in vitro differentiated cells
Organ
51
connective tissue
Project
51
AMP
Genome assembly (visualization)
32
hg19
23
GRCh38
Lab
49
AMP-T2D consortium
2
Struan F.A. Grant, CHOP
Audit category:
5
missing controlled_by
Audit category:
6
inconsistent control read length
files.read_length!
76
BIOSAMPLE
ASSAY
51 results
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ChIP-seq
ATAC-seq
total RNA-seq
Capture-C
DNase-seq
in vitro differentiated cells
adipocyte
36
8
5
1
1
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