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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 8ATAC-seq
  • 7ChIP-seq
  • 1Capture-C
  • 1DNase-seq
  • 1total RNA-seq
Assay category
  • 9DNA accessibility
  • 7DNA binding
  • 1Transcription
Target of assay
  • 6transcription factor
  • 1control
Date released
  • 8August, 2017
  • 4February, 2021
  • 2August, 2021
  • 2February, 2023
  • 2October, 2019
Available data
  • 10bigWig
  • 9bed bed3+
  • 8bam
  • 8bed narrowPeak
  • 8fastq
  • 4bed bedgraph
  • 3bigBed narrowPeak
  • 1bed broadPeak
  • 1bigBed broadPeak
Organism
  • 18Homo sapiens
Biosample type
  • 18in vitro differentiated cells
Organ
  • 18connective tissue
Project
  • 18AMP
Genome assembly (visualization)
  • 17hg19
  • 8GRCh38
Lab
  • 16AMP-T2D consortium
  • 2Struan F.A. Grant, CHOP
Audit category:
  • 4inconsistent control read length
replication_type!
  • unreplicated
BIOSAMPLE
ASSAY

18 results

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ATAC-seq
ChIP-seq
Capture-C
DNase-seq
total RNA-seq
in vitro differentiated cells
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