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Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
30
ChIP-seq
8
ATAC-seq
5
total RNA-seq
1
Capture-C
1
DNase-seq
Assay category
30
DNA binding
9
DNA accessibility
5
Transcription
Target of assay
37
histone
histone modification
22
transcription factor
20
broad histone mark
16
narrow histone mark
8
control
4
RNA binding protein
2
chromatin remodeller
Date released
31
August, 2017
8
February, 2021
2
August, 2021
2
February, 2023
2
October, 2019
Available data
33
bam
30
bigWig
29
fastq
19
bed narrowPeak
9
bed bed3+
4
bed bedgraph
4
tsv
3
bigBed narrowPeak
2
tagAlign
1
bed broadPeak
1
bigBed broadPeak
Organism
45
Homo sapiens
Biosample type
45
in vitro differentiated cells
Organ
45
connective tissue
Project
45
AMP
Genome assembly (visualization)
37
hg19
28
GRCh38
Lab
43
AMP-T2D consortium
2
Struan F.A. Grant, CHOP
Audit category:
5
missing controlled_by
Audit category:
6
inconsistent control read length
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
45 results
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ChIP-seq
ATAC-seq
total RNA-seq
Capture-C
DNase-seq
in vitro differentiated cells
adipocyte
30
8
5
1
1
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