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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
35
ChIP-seq
4
ATAC-seq
3
DNase-seq
3
total RNA-seq
2
WGBS
2
small RNA-seq
Assay category
35
DNA binding
7
DNA accessibility
5
Transcription
2
DNA methylation
Target of assay
17
histone
17
histone modification
11
broad histone mark
9
control
9
transcription factor
6
narrow histone mark
5
RNA binding protein
Date released
33
October, 2018
4
July, 2019
4
October, 2017
3
November, 2018
2
June, 2019
2
May, 2019
1
February, 2020
Available data
48
bam
40
fastq
39
bigWig
33
bed narrowPeak
29
bigBed narrowPeak
5
tsv
3
bed bed3+
3
bed broadPeak
3
bigBed broadPeak
2
bed bedMethyl
2
bigBed bedMethyl
Organism
49
Homo sapiens
Biosample type
49
tissue
Organ
49
pancreas
Project
49
AMP
Genome assembly (visualization)
39
GRCh38
35
hg19
Lab
49
AMP-T2D consortium
Audit category:
1
inconsistent control read length
files.platform.term_name!
Illumina NextSeq 500
BIOSAMPLE
ASSAY
49 results
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ChIP-seq
ATAC-seq
DNase-seq
total RNA-seq
WGBS
small RNA-seq
tissue
body of pancreas
35
4
3
3
2
2
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