Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 14ChIP-seq
  • 1ATAC-seq
  • 1RRBS
  • 1total RNA-seq
Assay category
  • 14DNA binding
  • 1DNA accessibility
  • 1DNA methylation
  • 1Transcription
Target of assay
  • 11histone
  • 11histone modification
  • 8broad histone mark
  • 3control
  • 3narrow histone mark
Date released
  • 9October, 2017
  • 6October, 2019
  • 1February, 2023
  • 1July, 2019
Available data
  • 28bam
  • 26bigWig
  • 25bed narrowPeak
  • bigBed narrowPeak
  • 17bed broadPeak
  • 14bed bed3+
  • 14bigBed broadPeak
  • 14tagAlign
  • 11fastq
  • 1bed bed3
  • 1bed bedMethyl
  • 1bigBed bedMethyl
  • 1tsv
Organism
  • 17Homo sapiens
Biosample type
  • 17tissue
Organ
  • 17brain
Project
  • 17AMP
Genome assembly (visualization)
  • 8hg19
  • 6GRCh38
Lab
  • 17AMP-T2D consortium
Audit category:
  • 1missing controlled_by
files.file_type!
  • bigBed narrowPeak
BIOSAMPLE
ASSAY

17 results

search-icontable-tab-icon
Clear Filters
ChIP-seq
ATAC-seq
RRBS
total RNA-seq
tissue
brain14111
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego