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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 5ChIP-seq
  • 1GRO-seq
  • 1total RNA-seq
Assay category
  • 5DNA binding
  • 1Transcription
Target of assay
  • 2histone
  • 2histone modification
  • 2transcription factor
  • 1broad histone mark
  • 1control
  • 1narrow histone mark
Date released
  • 5December, 2017
  • 1February, 2018
  • 1January, 2018
Available data
  • 7fastq
  • 6bam
  • 6bigWig
  • 4bed narrowPeak
  • 3bed bed3+
  • 1tsv
Organism
  • 7Homo sapiens
Biosample type
  • 7in vitro differentiated cells
Project
  • 7AMP
Genome assembly (visualization)
  • 6GRCh38
  • 6hg19
  • 1hg18
Lab
  • 7AMP-T2D consortium
Audit category:
  • 2inconsistent control read length
files.platform.term_name!
  • Illumina Genome Analyzer IIx
BIOSAMPLE
ASSAY

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ChIP-seq
GRO-seq
total RNA-seq
in vitro differentiated cells
definitive endodermal cell511
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