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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 16ChIP-seq
  • 5total RNA-seq
  • 1RRBS
Assay category
  • 16DNA binding
  • 5Transcription
  • 1DNA methylation
Target of assay
  • 12histone
  • 12histone modification
  • 7broad histone mark
  • 5narrow histone mark
  • 2RNA binding protein
  • 2control
  • 2transcription factor
  • 1chromatin remodeller
Date released
  • 15December, 2017
  • 5December, 2019
  • 1August, 2021
  • 1July, 2019
Available data
  • 25bam
  • 23bigWig
  • 18bed narrowPeak
  • 15bigBed narrowPeak
  • 15fastq
  • 5tsv
  • bed bed3+
  • 4tagAlign
  • 1bed bedMethyl
  • 1bed broadPeak
  • 1bigBed bedMethyl
  • 1bigBed broadPeak
Organism
  • 22Homo sapiens
Biosample type
  • 15in vitro differentiated cells
  • 7primary cell
Organ
  • 22epithelium
  • 22liver
Project
  • 22AMP
Genome assembly (visualization)
  • 20hg19
  • 19GRCh38
Lab
  • 22AMP-T2D consortium
files.file_type!
  • bed bed3+
BIOSAMPLE
ASSAY

22 results

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ChIP-seq
total RNA-seq
RRBS
in vitro differentiated cells
hepatocyte15
primary cell
hepatocyte151
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