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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 19ChIP-seq
  • 5total RNA-seq
  • 1RRBS
Assay category
  • 19DNA binding
  • 5Transcription
  • 1DNA methylation
Target of assay
  • 15histone
  • 15histone modification
  • 8broad histone mark
  • 7narrow histone mark
  • 2RNA binding protein
  • 2control
  • 2transcription factor
  • 1chromatin remodeller
Date released
  • 15December, 2017
  • 5December, 2019
  • 4August, 2021
  • 1July, 2019
Available data
  • 24bam
  • 22bigWig
  • 17bed narrowPeak
  • 15fastq
  • 14bigBed narrowPeak
  • 5tsv
  • 4tagAlign
  • 3bed bed3+
  • 1bed bedMethyl
  • 1bigBed bedMethyl
Organism
  • 25Homo sapiens
Biosample type
  • 15in vitro differentiated cells
  • 10primary cell
Organ
  • 25epithelium
  • 25liver
Project
  • 25AMP
Genome assembly (visualization)
  • 23hg19
  • 22GRCh38
Lab
  • 25AMP-T2D consortium
replication_type!
  • unreplicated
BIOSAMPLE
ASSAY

25 results

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ChIP-seq
total RNA-seq
RRBS
in vitro differentiated cells
hepatocyte15
primary cell
hepatocyte451
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