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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 17ChIP-seq
  • 5total RNA-seq
  • 1DNase-seq
  • 1RRBS
Assay category
  • 17DNA binding
  • 5Transcription
  • 1DNA accessibility
  • 1DNA methylation
Target of assay
  • 15histone
  • 15histone modification
  • 8broad histone mark
  • 7narrow histone mark
  • RNA binding protein
  • 2control
  • 2transcription factor
  • 1chromatin remodeller
Date released
  • 13December, 2017
  • 5December, 2019
  • 4August, 2021
  • 1July, 2019
  • 1June, 2019
Available data
  • 23bam
  • 21bigWig
  • 16bed narrowPeak
  • 13bigBed narrowPeak
  • 13fastq
  • 5tsv
  • 4bed bed3+
  • 4tagAlign
  • 1bed bedMethyl
  • 1bed broadPeak
  • 1bigBed bedMethyl
  • 1bigBed broadPeak
Organism
  • 24Homo sapiens
Biosample type
  • 13in vitro differentiated cells
  • 11primary cell
Organ
  • 24epithelium
  • 24liver
Project
  • 24AMP
Genome assembly (visualization)
  • 22hg19
  • 21GRCh38
Lab
  • 24AMP-T2D consortium
target.investigated_as!
  • RNA binding protein
BIOSAMPLE
ASSAY

24 results

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ChIP-seq
total RNA-seq
DNase-seq
RRBS
in vitro differentiated cells
hepatocyte13
primary cell
hepatocyte4511
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