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Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
ChIP-seq
5
total RNA-seq
1
DNase-seq
1
RRBS
Assay category
11
DNA binding
5
Transcription
1
DNA accessibility
1
DNA methylation
Target of assay
15
histone
15
histone modification
broad histone mark
7
narrow histone mark
2
RNA binding protein
2
control
2
transcription factor
1
chromatin remodeller
Date released
8
December, 2017
5
December, 2019
3
August, 2021
1
July, 2019
1
June, 2019
Available data
17
bam
15
bigWig
10
bed narrowPeak
8
bigBed narrowPeak
8
fastq
5
tsv
3
bed bed3+
3
tagAlign
1
bed bedMethyl
1
bed broadPeak
1
bigBed bedMethyl
1
bigBed broadPeak
Organism
18
Homo sapiens
Biosample type
10
primary cell
8
in vitro differentiated cells
Organ
18
epithelium
18
liver
Project
18
AMP
Genome assembly (visualization)
16
hg19
15
GRCh38
Lab
18
AMP-T2D consortium
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
18 results
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ChIP-seq
total RNA-seq
DNase-seq
RRBS
primary cell
hepatocyte
3
5
1
1
in vitro differentiated cells
hepatocyte
8
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