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Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
5
total RNA-seq
4
ChIP-seq
1
DNase-seq
1
RRBS
Assay category
5
Transcription
4
DNA binding
1
DNA accessibility
1
DNA methylation
Target of assay
15
histone
histone modification
8
broad histone mark
7
narrow histone mark
2
RNA binding protein
2
control
2
transcription factor
1
chromatin remodeller
Date released
5
December, 2019
3
December, 2017
1
August, 2021
1
July, 2019
1
June, 2019
Available data
10
bam
8
bigWig
5
tsv
3
bed narrowPeak
3
bigBed narrowPeak
3
fastq
1
bed bed3+
1
bed bedMethyl
1
bed broadPeak
1
bigBed bedMethyl
1
bigBed broadPeak
1
tagAlign
Organism
11
Homo sapiens
Biosample type
8
primary cell
3
in vitro differentiated cells
Organ
11
epithelium
11
liver
Project
11
AMP
Genome assembly (visualization)
9
hg19
8
GRCh38
Lab
11
AMP-T2D consortium
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
11 results
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total RNA-seq
ChIP-seq
DNase-seq
RRBS
primary cell
hepatocyte
5
1
1
1
in vitro differentiated cells
hepatocyte
3
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