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Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
ChIP-seq
5
total RNA-seq
1
DNase-seq
1
RRBS
Assay category
12
DNA binding
5
Transcription
1
DNA accessibility
1
DNA methylation
Target of assay
15
histone
15
histone modification
8
broad histone mark
narrow histone mark
2
RNA binding protein
2
control
2
transcription factor
1
chromatin remodeller
Date released
10
December, 2017
5
December, 2019
2
August, 2021
1
July, 2019
1
June, 2019
Available data
18
bam
16
bigWig
11
bed narrowPeak
10
bigBed narrowPeak
10
fastq
5
tsv
2
bed bed3+
2
tagAlign
1
bed bedMethyl
1
bed broadPeak
1
bigBed bedMethyl
1
bigBed broadPeak
Organism
19
Homo sapiens
Biosample type
10
in vitro differentiated cells
9
primary cell
Organ
19
epithelium
19
liver
Project
19
AMP
Genome assembly (visualization)
17
hg19
16
GRCh38
Lab
19
AMP-T2D consortium
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
19 results
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ChIP-seq
total RNA-seq
DNase-seq
RRBS
in vitro differentiated cells
hepatocyte
10
primary cell
hepatocyte
2
5
1
1
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