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Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
266
total RNA-seq
38
ATAC-seq
30
ChIP-seq
6
single cell RNA-seq
1
DNase-seq
1
FAIRE-seq
Assay category
272
Transcription
40
DNA accessibility
30
DNA binding
Target of assay
16
histone
16
histone modification
10
narrow histone mark
7
control
7
transcription factor
6
broad histone mark
2
RNA binding protein
Date released
116
July, 2018
113
August, 2017
38
November, 2019
36
May, 2021
24
May, 2022
6
April, 2018
6
September, 2017
2
March, 2020
1
March, 2019
Available data
342
bam
300
bigWig
268
tsv
153
fastq
59
bed narrowPeak
21
bed bed3+
9
tagAlign
8
bed broadPeak
6
txt
2
bedpe bed3+
2
bigBed narrowPeak
2
hic
1
bed bedMethyl
1
bedpe
1
bigBed bedMethyl
Organism
342
Homo sapiens
Biosample type
342
tissue
Organ
342
pancreas
Project
340
AMP
2
T1D
Genome assembly (visualization)
330
hg19
311
GRCh38
Lab
317
AMP-T2D consortium
24
Kyle Gaulton, UCSD
1
Mark McCarthy, Oxford
Audit category:
10
missing controlled_by
BIOSAMPLE
ASSAY
342 results
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total RNA-seq
ATAC-seq
ChIP-seq
single cell RNA-seq
DNase-seq
FAIRE-seq
tissue
islet of Langerhans
266
38
30
6
1
1
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