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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 37ATAC-seq
  • 20ChIP-seq
  • 1DNase-seq
  • 1FAIRE-seq
Assay category
  • 39DNA accessibility
  • 20DNA binding
Target of assay
  • 19histone
  • 19histone modification
  • 10narrow histone mark
  • 9broad histone mark
  • 1RNA binding protein
  • 1transcription factor
Date released
  • 20August, 2017
  • 19November, 2019
  • 18May, 2022
  • 2March, 2020
Available data
  • 342bam
  • 300bigWig
  • 268tsv
  • 153fastq
  • 59bed narrowPeak
  • 21bed bed3+
  • 9tagAlign
  • 8bed broadPeak
  • 6txt
  • 2bedpe bed3+
  • 2bigBed narrowPeak
  • 2hic
  • 1bed bedMethyl
  • 1bedpe
  • 1bigBed bedMethyl
Organism
  • 59Homo sapiens
Biosample type
  • 59tissue
Organ
  • 59pancreas
Project
  • 57AMP
  • 2T1D
Genome assembly (visualization)
  • 59hg19
  • 34GRCh38
Lab
  • 41AMP-T2D consortium
  • 18Kyle Gaulton, UCSD
Audit category:
  • 1missing controlled_by
BIOSAMPLE
ASSAY

59 results

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ATAC-seq
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DNase-seq
FAIRE-seq
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