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Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
97
total RNA-seq
28
ChIP-seq
20
ATAC-seq
6
single cell RNA-seq
1
DNase-seq
1
FAIRE-seq
Assay category
103
Transcription
28
DNA binding
22
DNA accessibility
Target of assay
14
histone
14
histone modification
8
narrow histone mark
7
control
7
transcription factor
6
broad histone mark
2
RNA binding protein
Date released
113
August, 2017
24
May, 2022
6
April, 2018
6
September, 2017
2
July, 2018
1
March, 2019
1
October, 2017
Available data
342
bam
300
bigWig
268
tsv
153
fastq
59
bed narrowPeak
21
bed bed3+
9
tagAlign
8
bed broadPeak
6
txt
2
bedpe bed3+
2
bigBed narrowPeak
2
hic
1
bed bedMethyl
1
bedpe
1
bigBed bedMethyl
Organism
153
Homo sapiens
Biosample type
153
tissue
Organ
153
pancreas
Project
153
AMP
Genome assembly (visualization)
141
hg19
122
GRCh38
Lab
127
AMP-T2D consortium
24
Kyle Gaulton, UCSD
1
Mark McCarthy, Oxford
1
Stephen Parker, UMich
Audit category:
10
missing controlled_by
BIOSAMPLE
ASSAY
153 results
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total RNA-seq
ChIP-seq
ATAC-seq
single cell RNA-seq
DNase-seq
FAIRE-seq
tissue
islet of Langerhans
97
28
20
6
1
1
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