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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 75ATAC-seq
  • 64single cell RNA-seq
  • 49total RNA-seq
  • 26ChIP-seq
  • 11DNase-seq
  • 2snATAC-seq
  • 1Hi-C
Assay category
  • 113Transcription
  • 88DNA accessibility
  • 26DNA binding
  • 13D chromatin structure
Target of assay
  • 20histone
  • 20histone modification
  • 10broad histone mark
  • 10narrow histone mark
  • 6control
Date released
  • 124August, 2021
  • 47September, 2023
  • 22April, 2019
  • 14May, 2023
  • 11June, 2019
  • 5February, 2021
  • 4October, 2019
  • 1December, 2019
Available data
  • 95bed narrowPeak
  • 64xls
  • 62txt
  • 37bam
  • 31bigWig
  • 29bigBed narrowPeak
  • 11bed bed3+
  • 11bed broadPeak
  • 11bigBed broadPeak
  • 5csv
  • 5tsv
  • 1hic
Organism
  • 228Homo sapiens
Biosample type
  • 228tissue
Organ
  • 228kidney
Project
  • 181AMP
  • 47KPMP
Genome assembly (visualization)
  • 106GRCh38
  • 32hg19
Lab
  • 138Katalin Susztak, Upenn
  • 47KPMP
  • 43AMP-T2D consortium
Audit category:
  • 5audit script error
BIOSAMPLE
ASSAY

228 results

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ATAC-seq
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