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Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
63
ChIP-seq
20
total RNA-seq
3
WGBS
1
Hi-C
1
RRBS
1
pCHi-C
1
single cell RNA-seq
Assay category
63
DNA binding
21
Transcription
4
DNA methylation
1
3D chromatin structure
Target of assay
43
control
20
histone
20
histone modification
12
broad histone mark
8
narrow histone mark
Date released
35
August, 2017
23
May, 2020
20
May, 2022
9
December, 2017
2
March, 2020
1
February, 2021
Available data
272
bam
bigWig
149
tsv
104
bed narrowPeak
71
fastq
70
tagAlign
40
bigBed narrowPeak
5
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
1
bed bedMethyl
1
bedpe bed3+
1
bigBed bedMethyl
1
csv
1
hic
Organism
90
Homo sapiens
Biosample type
90
tissue
Organ
90
liver
Project
90
AMP
Genome assembly (visualization)
3
hg19
1
GRCh38
Lab
70
AMP-T2D consortium
20
Karen Mohlke, UNC
files.file_type!
bigWig
BIOSAMPLE
ASSAY
90 results
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ChIP-seq
total RNA-seq
WGBS
Hi-C
RRBS
pCHi-C
single cell RNA-seq
tissue
liver
63
20
3
1
1
1
1
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