Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 67ChIP-seq
  • 2DNase-seq
  • 1RRBS
  • 1WGBS
Assay category
  • 67DNA binding
  • 2DNA accessibility
  • 2DNA methylation
Target of assay
  • 37transcription factor
  • 17control
  • 13histone modification
  • 12histone
  • 7broad histone mark
  • 5narrow histone mark
  • 2chromatin remodeller
  • 1RNA binding protein
Date released
  • 38December, 2017
  • 27August, 2017
  • 6November, 2018
Available data
  • 272bam
  • 252bigWig
  • 149tsv
  • 104bed narrowPeak
  • 71fastq
  • 70tagAlign
  • 40bigBed narrowPeak
  • 5bed bed3+
  • 2bed broadPeak
  • 2bigBed broadPeak
  • 1bed bedMethyl
  • 1bedpe bed3+
  • 1bigBed bedMethyl
  • 1csv
  • 1hic
Organism
  • 71Homo sapiens
Biosample type
  • 71tissue
Organ
  • 71liver
Project
  • 71AMP
Genome assembly (visualization)
  • 54hg19
  • 53GRCh38
Lab
  • 71AMP-T2D consortium
Audit category:
  • 27inconsistent control
Audit category:
  • 1inconsistent control read length
BIOSAMPLE
ASSAY

71 results

search-icontable-tab-icon
Clear Filters
ChIP-seq
DNase-seq
RRBS
WGBS
tissue
liver67211
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego