Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
167
total RNA-seq
140
ChIP-seq
20
ATAC-seq
3
WGBS
2
DNase-seq
1
Hi-C
1
RRBS
1
pCHi-C
1
single cell RNA-seq
1
small RNA-seq
Assay category
169
Transcription
140
DNA binding
22
DNA accessibility
4
DNA methylation
1
3D chromatin structure
Target of assay
61
histone modification
60
histone
42
control
42
narrow histone mark
37
transcription factor
18
broad histone mark
2
chromatin remodeller
1
RNA binding protein
Date released
193
May, 2020
47
August, 2017
40
May, 2022
38
December, 2017
6
November, 2018
6
October, 2019
3
July, 2019
3
March, 2020
1
February, 2021
Available data
267
bam
248
bigWig
149
tsv
100
bed narrowPeak
70
tagAlign
66
fastq
36
bigBed narrowPeak
5
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
1
bed bedMethyl
1
bedpe bed3+
1
bigBed bedMethyl
1
csv
1
hic
Organism
337
Homo sapiens
Biosample type
337
tissue
Organ
337
liver
Project
337
AMP
Genome assembly (visualization)
251
hg19
221
GRCh38
Lab
297
AMP-T2D consortium
40
Karen Mohlke, UNC
Audit category:
27
inconsistent control
Audit category:
1
inconsistent control read length
files.mapped_read_length!
50
BIOSAMPLE
ASSAY
337 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
WGBS
DNase-seq
Hi-C
RRBS
pCHi-C
single cell RNA-seq
small RNA-seq
tissue
liver
167
140
20
3
2
1
1
1
1
1
Download