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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 167total RNA-seq
  • 139ChIP-seq
  • 20ATAC-seq
  • 3WGBS
  • 1Hi-C
  • 1pCHi-C
  • 1single cell RNA-seq
  • 1small RNA-seq
Assay category
  • 169Transcription
  • 139DNA binding
  • 20DNA accessibility
  • 3DNA methylation
  • 13D chromatin structure
Target of assay
  • 64histone modification
  • 63histone
  • 41control
  • 41narrow histone mark
  • 34transcription factor
  • 22broad histone mark
  • 2chromatin remodeller
Date released
  • 193May, 2020
  • 48August, 2017
  • 40May, 2022
  • 35December, 2017
  • 6October, 2019
  • 4November, 2018
  • 3July, 2019
  • 3March, 2020
  • 1February, 2021
Available data
  • 264bam
  • 246bigWig
  • 149tsv
  • 98bed narrowPeak
  • 70tagAlign
  • 62fastq
  • 35bigBed narrowPeak
  • 2bed bed3+
  • 1bedpe bed3+
  • 1csv
  • 1hic
Organism
  • 333Homo sapiens
Biosample type
  • 333tissue
Organ
  • 333liver
Project
  • 333AMP
Genome assembly (visualization)
  • 248hg19
  • 219GRCh38
Lab
  • 293AMP-T2D consortium
  • 40Karen Mohlke, UNC
Audit category:
  • 27inconsistent control
files.read_length!
  • 36
BIOSAMPLE
ASSAY

333 results

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total RNA-seq
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tissue
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