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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 167total RNA-seq
  • 97ChIP-seq
  • 20ATAC-seq
  • 2DNase-seq
  • 1Hi-C
  • 1pCHi-C
  • 1single cell RNA-seq
  • 1small RNA-seq
Assay category
  • 169Transcription
  • 97DNA binding
  • 22DNA accessibility
  • 13D chromatin structure
Target of assay
  • 33transcription factor
  • 32control
  • 32histone
  • 32histone modification
  • 29narrow histone mark
  • 3broad histone mark
  • 2chromatin remodeller
  • 1RNA binding protein
Date released
  • 193May, 2020
  • August, 2017
  • 40May, 2022
  • 38December, 2017
  • 6November, 2018
  • 6October, 2019
  • 3July, 2019
  • 3March, 2020
  • 1February, 2021
Available data
  • 247bam
  • 235bigWig
  • 149tsv
  • 87bed narrowPeak
  • 50tagAlign
  • 44fastq
  • 35bigBed narrowPeak
  • 2bed bed3+
  • 2bed broadPeak
  • 2bigBed broadPeak
  • 1bedpe bed3+
  • 1csv
  • 1hic
Organism
  • 290Homo sapiens
Biosample type
  • 290tissue
Organ
  • 290liver
Project
  • 290AMP
Genome assembly (visualization)
  • 236hg19
  • 207GRCh38
Lab
  • 250AMP-T2D consortium
  • 40Karen Mohlke, UNC
Audit category:
  • 27inconsistent control
month_released!
  • August, 2017
BIOSAMPLE
ASSAY

290 results

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total RNA-seq
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ATAC-seq
DNase-seq
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pCHi-C
single cell RNA-seq
small RNA-seq
tissue
liver167972021111
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