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Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
164
total RNA-seq
103
ChIP-seq
20
ATAC-seq
3
WGBS
1
DNase-seq
1
Hi-C
1
small RNA-seq
Assay category
165
Transcription
103
DNA binding
21
DNA accessibility
3
DNA methylation
1
3D chromatin structure
Target of assay
60
histone modification
59
histone
41
control
40
narrow histone mark
19
broad histone mark
2
transcription factor
Date released
193
May, 2020
48
August, 2017
40
May, 2022
8
December, 2017
2
March, 2020
1
July, 2019
1
November, 2018
Available data
226
bam
208
bigWig
145
tsv
70
tagAlign
63
bed narrowPeak
32
fastq
6
bigBed narrowPeak
1
bed bed3+
1
bed broadPeak
1
bedpe bed3+
1
bigBed broadPeak
1
hic
Organism
293
Homo sapiens
Biosample type
293
tissue
Organ
293
liver
Project
293
AMP
Genome assembly (visualization)
209
hg19
180
GRCh38
Lab
253
AMP-T2D consortium
40
Karen Mohlke, UNC
Audit category:
1
inconsistent control read length
BIOSAMPLE
ASSAY
293 results
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total RNA-seq
ChIP-seq
ATAC-seq
WGBS
DNase-seq
Hi-C
small RNA-seq
tissue
liver
164
103
20
3
1
1
1
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