Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 3accessible chromatin
  • 3chromatin state
  • 2candidate regulatory elements
  • 2target gene predictions
  • 1binding sites
  • 1caQTL
  • 1eQTL
  • 1histone modifications
Date released
  • 4February, 2021
  • 2February, 2024
  • 2September, 2022
  • 1June, 2020
  • 1March, 2020
  • 1May, 2021
  • 1May, 2022
  • 1October, 2019
  • 1October, 2022
Available data
  • 11bed bed3+
  • 3bed bed9
  • 1bigBed bed9
  • 1bigWig
Organism
  • 14Homo sapiens
Collection Tags
  • 5DGA
  • 3 T2DKP
  • 3ChIP-Atlas
  • 2ENCODE
  • 2EpiMap
  • 1T2D
Biosample type
  • 7in vitro differentiated cells
  • 6primary cell
  • 1stem cell
Organ
  • 14connective tissue
Project
  • 14AMP
Genome assembly (visualization)
  • 14hg19
  • 3GRCh38
software_used.software.name!
  • r
BIOSAMPLE
TYPE

14 results

search-icontable-tab-icon
Clear Filters
accessible chromatin
chromatin state
candidate regulatory elements
target gene predictions
binding sites
caQTL
eQTL
histone modifications
in vitro differentiated cells
mesenchymal stem cell121111
primary cell
mesenchymal stem cell21111
stem cell
mesenchymal stem cell1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego