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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 4snATAC-seq
  • 1Hi-C
  • 1RRBS
  • 1pCHi-C
  • 1total RNA-seq
Assay category
  • 4DNA accessibility
  • 13D chromatin structure
  • 1DNA methylation
  • 1Transcription
Date released
  • 4January, 2021
  • 2March, 2020
  • 1July, 2019
  • 1May, 2021
Available data
  • bam
  • 19bigWig
  • 19fastq
  • 16bed narrowPeak
  • 16bigBed narrowPeak
  • 8bed broadPeak
  • 7tagAlign
  • 3bed bedMethyl
  • 3bigBed bedMethyl
  • 2bed bed3+
  • 2bigBed broadPeak
  • 2tsv
  • 1bedpe bed3+
  • 1hic
Organism
  • 8Homo sapiens
Biosample type
  • 8tissue
Organ
  • 8pancreas
Project
  • 4AMP
  • 4T1D
Genome assembly (visualization)
  • 2hg19
Lab
  • 5Kyle Gaulton, UCSD
  • 3AMP-T2D consortium
files.file_type!
  • bam
BIOSAMPLE
ASSAY

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snATAC-seq
Hi-C
RRBS
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total RNA-seq
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