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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 4snATAC-seq
  • 3ChIP-seq
  • 1Hi-C
  • 1RRBS
  • 1pCHi-C
  • 1total RNA-seq
Assay category
  • 4DNA accessibility
  • 3DNA binding
  • 13D chromatin structure
  • 1DNA methylation
  • 1Transcription
Target of assay
  • 3control
Date released
  • 4January, 2021
  • 2August, 2017
  • 2March, 2020
  • 1July, 2019
  • 1May, 2021
  • 1October, 2018
Available data
  • 22bam
  • bigWig
  • 19fastq
  • 16bed narrowPeak
  • 16bigBed narrowPeak
  • 8bed broadPeak
  • 7tagAlign
  • 3bed bedMethyl
  • 3bigBed bedMethyl
  • 2bed bed3+
  • 2bigBed broadPeak
  • 2tsv
  • 1bedpe bed3+
  • 1hic
Organism
  • 10Homo sapiens
Biosample type
  • 11tissue
Organ
  • 11pancreas
Project
  • 7AMP
  • 4T1D
Genome assembly (visualization)
  • 2hg19
Lab
  • 6AMP-T2D consortium
  • 5Kyle Gaulton, UCSD
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  • bigWig
BIOSAMPLE
ASSAY

11 results

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snATAC-seq
ChIP-seq
Hi-C
RRBS
pCHi-C
total RNA-seq
tissue
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