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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 13ChIP-seq
  • 2DNase-seq
  • 2WGBS
  • 1FAIRE-seq
  • 1total RNA-seq
Assay category
  • 13DNA binding
  • 3DNA accessibility
  • 2DNA methylation
  • 1Transcription
Target of assay
  • 12histone
  • 12histone modification
  • 8broad histone mark
  • 4narrow histone mark
  • 1RNA binding protein
  • 1transcription factor
Date released
  • 12August, 2017
  • 3November, 2018
  • 2June, 2019
  • 1March, 2020
  • 1October, 2018
Available data
  • 22bam
  • 19bigWig
  • 19fastq
  • 16bed narrowPeak
  • 16bigBed narrowPeak
  • 8bed broadPeak
  • 7tagAlign
  • 3bed bedMethyl
  • 3bigBed bedMethyl
  • 2bed bed3+
  • 2bigBed broadPeak
  • 2tsv
  • 1bedpe bed3+
  • 1hic
Organism
  • 13Homo sapiens
Biosample type
  • 19tissue
Organ
  • 19pancreas
Project
  • 19AMP
Genome assembly (visualization)
  • 18GRCh38
  • 17hg19
Lab
  • 19AMP-T2D consortium
Audit category:
  • 4inconsistent control read length
  • 1inconsistent assembly
BIOSAMPLE
ASSAY

19 results

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ChIP-seq
DNase-seq
WGBS
FAIRE-seq
total RNA-seq
tissue
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