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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
ChIP-seq
4
snATAC-seq
2
DNase-seq
2
WGBS
1
FAIRE-seq
1
Hi-C
1
RRBS
1
pCHi-C
Assay category
9
DNA binding
7
DNA accessibility
3
DNA methylation
1
3D chromatin structure
Target of assay
6
histone
6
histone modification
4
broad histone mark
2
control
2
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
7
August, 2017
4
January, 2021
3
November, 2018
2
June, 2019
2
March, 2020
2
October, 2018
1
July, 2019
Available data
14
bam
12
bigWig
12
fastq
10
bed narrowPeak
10
bigBed narrowPeak
3
bed bedMethyl
3
bigBed bedMethyl
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
1
bedpe bed3+
1
hic
1
tsv
Organism
21
Homo sapiens
Biosample type
21
tissue
Organ
21
pancreas
Project
17
AMP
4
T1D
Genome assembly (visualization)
12
hg19
11
GRCh38
Lab
17
AMP-T2D consortium
4
Kyle Gaulton, UCSD
Audit category:
4
inconsistent control read length
BIOSAMPLE
ASSAY
21 results
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ChIP-seq
snATAC-seq
DNase-seq
WGBS
FAIRE-seq
Hi-C
RRBS
pCHi-C
tissue
pancreas
9
4
2
2
1
1
1
1
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