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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 4ChIP-seq
  • 4snATAC-seq
  • 2DNase-seq
  • 2WGBS
  • 2total RNA-seq
  • 1FAIRE-seq
  • 1Hi-C
  • 1RRBS
  • 1pCHi-C
Assay category
  • 7DNA accessibility
  • 4DNA binding
  • 3DNA methylation
  • 2Transcription
  • 13D chromatin structure
Target of assay
  • histone
  • 12histone modification
  • 8broad histone mark
  • 4narrow histone mark
  • 3control
  • 1RNA binding protein
  • 1transcription factor
Date released
  • 4January, 2021
  • 3March, 2020
  • 3November, 2018
  • 2August, 2017
  • 2June, 2019
  • 2October, 2018
  • 1July, 2019
  • 1May, 2021
Available data
  • 10bam
  • 7bigWig
  • 7fastq
  • 4bed narrowPeak
  • 4bigBed narrowPeak
  • 3bed bedMethyl
  • 3bigBed bedMethyl
  • 2bed bed3+
  • 2bed broadPeak
  • 2bigBed broadPeak
  • 2tsv
  • 1bedpe bed3+
  • 1hic
  • 1tagAlign
Organism
  • 17Homo sapiens
Biosample type
  • 18tissue
Organ
  • 18pancreas
Project
  • 14AMP
  • 4T1D
Genome assembly (visualization)
  • 7hg19
  • 6GRCh38
Lab
  • 13AMP-T2D consortium
  • 5Kyle Gaulton, UCSD
target.investigated_as!
  • histone
BIOSAMPLE
ASSAY

18 results

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ChIP-seq
snATAC-seq
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WGBS
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pCHi-C
tissue
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