Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
ATAC-seq
8
ChIP-seq
6
single cell RNA-seq
4
total RNA-seq
1
Hi-C
Assay category
10
Transcription
9
DNA accessibility
8
DNA binding
1
3D chromatin structure
Target of assay
8
histone
8
histone modification
4
broad histone mark
4
narrow histone mark
Date released
13
September, 2018
April, 2018
5
July, 2018
4
May, 2022
2
October, 2018
1
August, 2017
1
August, 2018
1
October, 2022
1
September, 2017
Available data
23
bam
23
bigWig
23
fastq
13
bed narrowPeak
10
tsv
5
bigBed narrowPeak
4
zippedFastqFolder
1
bedpe bed3+
1
cool
1
hic
Organism
28
Homo sapiens
Biosample type
28
primary cell
Organ
28
epithelium
28
pancreas
Project
23
AMP
5
HPAP
Genome assembly (visualization)
24
hg19
23
GRCh38
Lab
23
AMP-T2D consortium
5
Klaus Kaestner, Upenn
Audit category:
1
audit script error
1
inconsistent ontology term
Audit category:
8
missing controlled_by
month_released!
April, 2018
BIOSAMPLE
ASSAY
28 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
ChIP-seq
single cell RNA-seq
total RNA-seq
Hi-C
primary cell
pancreatic acinar cell
9
8
6
4
1
Download