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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 9ATAC-seq
  • 8ChIP-seq
  • 7single cell RNA-seq
  • 4total RNA-seq
  • 1Hi-C
Assay category
  • 11Transcription
  • 9DNA accessibility
  • 8DNA binding
  • 13D chromatin structure
Target of assay
  • 8histone
  • 8histone modification
  • 4broad histone mark
  • 4narrow histone mark
Date released
  • 13September, 2018
  • 6April, 2018
  • July, 2018
  • 4May, 2022
  • 2October, 2018
  • 1August, 2017
  • 1August, 2018
  • 1October, 2022
  • 1September, 2017
Available data
  • 24bam
  • 24bigWig
  • 21fastq
  • 13bed narrowPeak
  • 11tsv
  • 5bigBed narrowPeak
  • 4zippedFastqFolder
  • 1bedpe bed3+
  • 1cool
  • 1hic
Organism
  • 29Homo sapiens
Biosample type
  • 29primary cell
Organ
  • 29epithelium
  • 29pancreas
Project
  • 24AMP
  • 5HPAP
Genome assembly (visualization)
  • 25hg19
  • 24GRCh38
Lab
  • 24AMP-T2D consortium
  • 5Klaus Kaestner, Upenn
Audit category:
  • 1audit script error
Audit category:
  • 8missing controlled_by
month_released!
  • July, 2018
BIOSAMPLE
ASSAY

29 results

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ATAC-seq
ChIP-seq
single cell RNA-seq
total RNA-seq
Hi-C
primary cell
pancreatic acinar cell98741
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