Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
single cell RNA-seq
8
ATAC-seq
8
ChIP-seq
4
total RNA-seq
1
Hi-C
Assay category
16
Transcription
8
DNA accessibility
8
DNA binding
1
3D chromatin structure
Target of assay
8
histone
8
histone modification
4
broad histone mark
4
narrow histone mark
Date released
13
September, 2018
6
April, 2018
5
July, 2018
4
May, 2022
2
October, 2018
1
August, 2017
1
August, 2018
1
October, 2022
September, 2017
Available data
28
bam
28
bigWig
25
fastq
16
tsv
12
bed narrowPeak
4
bigBed narrowPeak
4
zippedFastqFolder
1
bedpe bed3+
1
cool
1
hic
Organism
33
Homo sapiens
Biosample type
33
primary cell
Organ
33
epithelium
33
pancreas
Project
28
AMP
5
HPAP
Genome assembly (visualization)
29
hg19
28
GRCh38
Lab
28
AMP-T2D consortium
5
Klaus Kaestner, Upenn
Audit category:
1
audit script error
1
inconsistent ontology term
Audit category:
8
missing controlled_by
month_released!
September, 2017
BIOSAMPLE
ASSAY
33 results
search-icon
table-tab-icon
Clear Filters
single cell RNA-seq
ATAC-seq
ChIP-seq
total RNA-seq
Hi-C
primary cell
pancreatic acinar cell
12
8
8
4
1
Download