Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 9ATAC-seq
  • 8ChIP-seq
  • 4single cell RNA-seq
  • 4total RNA-seq
Assay category
  • 9DNA accessibility
  • 8DNA binding
  • 8Transcription
Target of assay
  • 8histone
  • 8histone modification
  • 4broad histone mark
  • 4narrow histone mark
Date released
  • 13September, 2018
  • 4May, 2022
  • 2April, 2018
  • 2July, 2018
  • 2October, 2018
  • 1August, 2017
  • 1September, 2017
Available data
  • 21bam
  • 21bigWig
  • 19fastq
  • 13bed narrowPeak
  • 8tsv
  • 5bigBed narrowPeak
  • 4zippedFastqFolder
Organism
  • 25Homo sapiens
Biosample type
  • 25primary cell
Organ
  • 25epithelium
  • 25pancreas
Project
  • 21AMP
  • 4HPAP
Genome assembly (visualization)
  • 21GRCh38
  • 21hg19
Lab
  • 21AMP-T2D consortium
  • 4Klaus Kaestner, Upenn
Audit category:
  • 1inconsistent ontology term
Audit category:
  • 8missing controlled_by
BIOSAMPLE
ASSAY

25 results

search-icontable-tab-icon
Clear Filters
ATAC-seq
ChIP-seq
single cell RNA-seq
total RNA-seq
primary cell
pancreatic acinar cell9844
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego