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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 12single cell RNA-seq
  • 9ATAC-seq
  • 4total RNA-seq
  • 1Hi-C
Assay category
  • 16Transcription
  • 9DNA accessibility
  • 13D chromatin structure
Target of assay
  • histone
  • 8histone modification
  • 4broad histone mark
  • 4narrow histone mark
Date released
  • 6April, 2018
  • 5July, 2018
  • 5September, 2018
  • 4May, 2022
  • 2October, 2018
  • 1August, 2017
  • 1August, 2018
  • 1October, 2022
  • 1September, 2017
Available data
  • 21bam
  • 21bigWig
  • 18fastq
  • 16tsv
  • 5bed narrowPeak
  • 5bigBed narrowPeak
  • 4zippedFastqFolder
  • 1bedpe bed3+
  • 1cool
  • 1hic
Organism
  • 26Homo sapiens
Biosample type
  • 26primary cell
Organ
  • 26epithelium
  • 26pancreas
Project
  • 21AMP
  • 5HPAP
Genome assembly (visualization)
  • 22hg19
  • 21GRCh38
Lab
  • 21AMP-T2D consortium
  • 5Klaus Kaestner, Upenn
Audit category:
  • 1audit script error
  • 1inconsistent ontology term
target.investigated_as!
  • histone
BIOSAMPLE
ASSAY

26 results

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single cell RNA-seq
ATAC-seq
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Hi-C
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pancreatic acinar cell12941
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