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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
52
total RNA-seq
35
ATAC-seq
31
WGBS
12
single cell RNA-seq
11
ChIP-seq
1
Hi-C
Assay category
64
Transcription
35
DNA accessibility
31
DNA methylation
11
DNA binding
1
3D chromatin structure
Target of assay
6
control
5
histone
5
histone modification
3
broad histone mark
2
narrow histone mark
Date released
47
May, 2022
27
February, 2023
17
September, 2020
13
September, 2018
12
August, 2017
7
July, 2018
6
February, 2021
5
August, 2020
3
April, 2018
2
August, 2018
2
September, 2017
1
October, 2022
Available data
94
fastq
47
zippedFastqFolder
40
bigWig
39
bam
28
tsv
11
bed narrowPeak
6
bigBed narrowPeak
1
bedpe bed3+
1
cool
1
hic
Organism
142
Homo sapiens
Biosample type
142
primary cell
Organ
142
epithelium
142
pancreas
Project
103
HPAP
39
AMP
Genome assembly (visualization)
40
GRCh38
34
hg19
Lab
103
Klaus Kaestner, Upenn
39
AMP-T2D consortium
Audit category:
1
audit script error
files.read_length!
44
BIOSAMPLE
ASSAY
142 results
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total RNA-seq
ATAC-seq
WGBS
single cell RNA-seq
ChIP-seq
Hi-C
primary cell
pancreatic alpha cell
52
35
31
12
11
1
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