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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 42total RNA-seq
  • 13ChIP-seq
  • 9single cell RNA-seq
  • 1Hi-C
Assay category
  • 51Transcription
  • 13DNA binding
  • 13D chromatin structure
Target of assay
  • 7histone
  • 7histone modification
  • 6control
  • 4narrow histone mark
  • 3broad histone mark
Date released
  • 27February, 2023
  • 15September, 2020
  • 13August, 2017
  • 5July, 2018
  • 2April, 2018
  • 2August, 2018
  • 1October, 2022
Available data
  • 64fastq
  • 22bam
  • 16bigWig
  • 9tsv
  • 7bed narrowPeak
  • 1bedpe bed3+
  • 1cool
  • 1hic
Organism
  • 65Homo sapiens
Biosample type
  • 65primary cell
Organ
  • 65epithelium
  • 65pancreas
Project
  • 43HPAP
  • 22AMP
Genome assembly (visualization)
  • 17hg19
  • 16GRCh38
Lab
  • 43Klaus Kaestner, Upenn
  • 22AMP-T2D consortium
Audit category:
  • 1audit script error
Audit category:
  • 2inconsistent control read length
files.run_type!
  • paired-ended
BIOSAMPLE
ASSAY

65 results

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total RNA-seq
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pancreatic alpha cell421391
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