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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
42
total RNA-seq
31
WGBS
13
ChIP-seq
9
single cell RNA-seq
1
Hi-C
Assay category
51
Transcription
31
DNA methylation
13
DNA binding
1
3D chromatin structure
Target of assay
7
histone
7
histone modification
6
control
4
narrow histone mark
3
broad histone mark
Date released
27
February, 2023
25
May, 2022
15
September, 2020
13
August, 2017
6
February, 2021
5
July, 2018
2
April, 2018
2
August, 2018
1
October, 2022
Available data
64
fastq
22
bam
16
bigWig
15
tsv
7
bed narrowPeak
1
bedpe bed3+
1
cool
1
hic
Organism
96
Homo sapiens
Biosample type
96
primary cell
Organ
96
pancreas
65
epithelium
Project
74
HPAP
22
AMP
Genome assembly (visualization)
17
hg19
16
GRCh38
Lab
74
Klaus Kaestner, Upenn
22
AMP-T2D consortium
Audit category:
1
audit script error
Audit category:
2
inconsistent control read length
files.run_type!
paired-ended
BIOSAMPLE
ASSAY
96 results
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total RNA-seq
WGBS
ChIP-seq
single cell RNA-seq
Hi-C
primary cell
pancreatic alpha cell
42
31
13
9
1
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