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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 52total RNA-seq
  • 35ATAC-seq
  • 31WGBS
  • 13ChIP-seq
  • 1single cell RNA-seq
Assay category
  • 53Transcription
  • 35DNA accessibility
  • 31DNA methylation
  • 13DNA binding
Target of assay
  • 7histone
  • 7histone modification
  • 6control
  • 4narrow histone mark
  • 3broad histone mark
Date released
  • 47May, 2022
  • 27February, 2023
  • 17September, 2020
  • 14August, 2017
  • 13September, 2018
  • 6February, 2021
  • 5August, 2020
  • 2September, 2017
  • 1April, 2018
Available data
  • 85fastq
  • 47zippedFastqFolder
  • 31bigWig
  • 30bam
  • 17tsv
  • 13bed narrowPeak
  • 6bigBed narrowPeak
Organism
  • 132Homo sapiens
Biosample type
  • 132primary cell
Organ
  • 132epithelium
  • 132pancreas
Project
  • 102HPAP
  • 30AMP
Genome assembly (visualization)
  • 31GRCh38
  • 24hg19
Lab
  • 102Klaus Kaestner, Upenn
  • 30AMP-T2D consortium
Audit category:
  • 2inconsistent control read length
replication_type!
  • anisogenic
BIOSAMPLE
ASSAY

132 results

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total RNA-seq
ATAC-seq
WGBS
ChIP-seq
single cell RNA-seq
primary cell
pancreatic alpha cell523531131
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